“The things we hate about ourselves aren't more real than things we like about ourselves.” Ellen Goodman


Showing posts with label CYP3A4/5. Show all posts
Showing posts with label CYP3A4/5. Show all posts

Tuesday, August 26, 2014

The issue of clarithromycin and increased cardiac deaths #4 - Where are the potential sources of variability?

1. Bioavailability
Regardless of its touted lipophilicity, clarithromycin has a reported average bioavailability of only about 50%. Generally, as a guiding principle, the lower the bioavailability, the greater the potential for variability in systemic availability.

2. Uncertain target site concentrations
There are two associated problems here.

Firstly, clarithromycin has an elimination half life of about 3-5 hours at low doses and 5-7 at higher doses. At a 12 hourly dosing intervals, there will be significant fluctuations in the plasma concentration profile. Even if it is administered at 8 hourly intervals, and if half-life is assumed to be at the high end of the range, say 8 hours, there will be at least a 2 fold fluctuation between peaks and trough. While this may meet the needs of anti-bacterial efficacy (assuming we keep trough levels above MIC), the levels of the peaks may predispose to cardiac toxicity if it is able to inhibit HERG potassium channels. To some extent, we can mitigate the fluctuations by using extended release formulations, but this may be at the expense of even more variability in bioavailability.
Comparison between normal formulation and extended release formulations

Secondly, since we do not routinely measure either plasma or tissue concentrations, we have little idea if adequate concentrations are being achieved at the target site. Here, there is some more uncertainty. Tissue and cellular concentrations tend to be higher than plasma unbound concentrations, but concentrations in the extra-cellular fluid (where the bugs are) are variable and may be lower than unbound concentrations of clarithromycin. These are functions of variable protein binding and the variable net activities of specific influx and efflux membrane transporters.

Consequent upon the previous two points, the differential effects of clarithromycin on the bacteria and on HERG channels may be variable between individuals not only because they relate to different effect compartments but the latter may relate to heights of the peak while the former to trough concentrations being above the MIC.
Relationship between QT prolongation ad clarithromycin concentrations

Although the IC50 for clarithromycin on the HERG channel is about a 100 times higher than the MIC, arrhythmic risk is associated with lower extent of inhibition. Hence cardiac risk is seen at much lower IC10 or IC20 concentrations

Added to all these, is the uncertainty contributed by an active 14-OH metabolite of clarithromycin.

3. Inter-individual variability in pharmacokinetics
Clarithromycin is both a substrate and inhibitor of CYP3A4. This metabolic pathway is also responsible to generating the active 14-OH metabolite. Variable CYP3A4 activity therefore results in a variable mix of clarithromycin and its active 14-OH metabolite.

There is a very high extent of variabilty in CYP3A4 activity in any population studied. There are also significant differences in activity between men and women (women generally higher). While there are genetic polymorphisms associated with CYP3A4, no single genetic variant has been able to account for the variability within a population. On the other hand, CYP3A4 is also vulnerable to many food and drug interactions.

To make matters more complicated, clarithromycin inhibits its own metabolism by CYP3A4, and exhibits a non-linear pharmacokinetic profile.

4. Inter-individual variability in susceptibility to QT prolongation
The HERG potassium channel gene is genetically polymorphic and variants may predispose to variable susceptibility to QT prolongation. Added to this is the uncertainty about appropriate dosing regiments between different ethnic populations, who may have different body weights and distributional volumes, as well as different exposures to CYP3A4 food and drug interactions.

5. Variability in microbial susceptibility
Apart from differences in anti-microbial efficacy due to variability in drug permeation to target sites, bacteria do differ in how susceptible they are to concentrations of clarithromycin. While sensitive bacteria generally have MICs in easily achievable range, resistance genes have become more prevalent and differences in bacterial sensitivity has become more common.

6. Compliance issues
One must never forget the variability that may be caused by failure of the patient to medicate according to instructions, leading to highly irregular dosing intervals and therefore variable degree of fluctuations in circulating drug concentrations.


Taking all these uncertainties into consideration, the question is how to ensure the patient gets optimal dosing? Think about it.

[To be continued]

Friday, August 22, 2014

The issue of clarithromycin and increased cardiac deaths #2 - Pharmacology

Clarithromycin is a macrolide bacteriostatic antimicrobial that came onto the market in 1991. It enjoyed considerable success as an orally administrable macrolide, being relatively lipophilic and having a slightly longer elimination half-life. Came off patent about 10 years ago.

It acts by inhibiting bacterial protein synthesis by blocking the ribosomal RNA. Resistance develops as bacteria acquire various resistance genes, such as the plasmid erm (A) gene that confers an ability to methylate the adenine in the binding site.

Clarithromycin can be administered orally with a bioavailability of about 50%. Its permeability across biological membranes is only due in part to its lipophilicity. A significant part of the process depends on a complex interplay between influx and efflux transporters expressed on various membranes. Consequently intra-cellular, and tissue concentrations do not correlate with circulating unbound drug concentrations. Interestingly, tissue interstitial fluid concentrations are lower than free drug concentrations in plasma, but intra-cellular concentrations are to a variably extent much higher than plasma free concentrations.

The protein binding of clarithromycin is about 60-70%. The Volume of Distribution is about 10 L/kg, which is consistent with significant permeability into tissues. Again this increased permeability results not only from lipophilicity but from the complex interplay of influx and efflux transporters, in this case clearly favouring influx.

Clarithromycin is eliminated by both hepatic metabolism and renal elimination. It is extensively metabolized by CYP3A4 (which it also inhibits), to a principal metabolite 14-(R) hydroxyclarithromycin, which is also pharmacologically (less) active. The pharmacokinetics is not linear, and the elimination half-life increases from 3-5 hours at lower doses, to 5-7 hours at higher doses. Tissue concentrations persist for much longer.

Clarithromycin produces a range of adverse reactions, but the one that concerns us for this discussion is with respect to cardiac death. Like many of the macrolides, clarithromycin has an effect on the myocardial delayed potassium rectifier current, leading a prolongation of the QT interval of the ECG. This prolongation of the QT interval is associated with risk of torsades de pointe and a fatal ventricular arrhythmia.

The usual adult dosage is 250-500 mg 12 hourly for 7-14 days.

Clarithromycin is a drug with very interesting pharmacological properties. Give a thought as to how these properties contribute to variability in the clinical response and the risk-benefit ratio particularly with respect to the problem of cardiac death.

(To be continued)

Wednesday, September 29, 2010

Clopidogrel - variability in response

Indian Heart Journal. 2008 Nov-Dec; 60(6): 543-7

The use of clopidogrel presents another interesting challenge with respect to the variability in drug response.

Clopidogrel is a a platelet inhibitor, acting through irreversible binding to the P2Y12 purinergic receptor on the platelet membrane; though it is not clopidogrel itself that binds, but the active metabolite. The PK of clopidogrel itself is quite complex. Upon oral administration about 90% of clopidogrel is removed through the action of circulating and hepatic esterases to inactive metabolites. Only about 10-15% gets activated by CYP2C19 and CYP3A4 to the final metabolite that binds to the P2Y12 receptor. As the receptor inactivation is irreversible, the recovery of function is dependent on fresh platelet regeneration from megakaryocytes.

The way clopidogrel produces its action is therefore fraught with all kinds of problems which clearly contributes to the observed variability in therapeutic response. These are potential sources of variability:

a) high first pass and low active metabolite bioavailability
b) variability of CYP3A4 and CYP2C19 activities due to pharmacogenetics and food/drug interactions
c) irreversible binding to receptor
d) temporal delay in onset, as well as in recovery of platelet function
e] variability in rate of platelet recovery.

This extent of variability really points to a crying need for dosages of clopidogrel to be optimized according to some clinical measure of drug response. Unlike the situation with warfarin however, there isn't a universally accepted way of monitoring plate function. Nevertheless, platelet function test is shaping up to become a standard bedside test for this very reason. A recent review by Williams et al (Thromb Haemost 2010; 103: 29–33) is worth a read.

Drug level testing would clearly not be useful as it is not clopidogrel itself but the metabolite that is active. Furthermore the irreversible binding to the platelet purinergic receptor would not allow concentrations of the active metabolite to be useful in predicting the level of platelet inhibition.

Sunday, September 19, 2010

The Cytochrome p450 enzymes belong to probably the largest gene superfamilies known. Comprising more than 6500 genes, there are 57 enzymes alone in humans, involved with the metabolism of endogenous and exogenous compounds. The original CYP450 gene is a very ancient one, tracing its origins back perhaps 2 billion years. All the known members of the gene superfamily probably arose from this ancient precursor through gene duplications etc.

This vast numbers of members is required at least in part for the metabolism of endogenous substrates, but it is likely that many have developed for the purpose of dealing with environmental toxicants which enter the body through mucosal barriers of the gut, and lungs, but also the skin. As the main route for the entry of environmental chemicals is via oral ingestion, the largest amount of p450 is found in the liver, as well as the intestinal linings.

The largest amount present in the liver belong to the 3A family. However, the abundance of the enzymes does not translate directly to the relatively importance of the enzyme with respect to the metabolism of pharmaceuticals. This is likely because the enzymic isoforms have evolved primarily for environmental chemicals, while pharmaceuticals as a subset of environmental chemicals, are chemicals with a very short and recent history.

The 3 most important families for pharmaceutical detoxification are CYP3A, CYP2D6 and CYP2C.

The recognition of CYP450's role in dealing with environmental chemicals allows us to anticipate that interactions between environmental chemicals (including dietary phytochemicals) and pharmaceuticals at the level of the CYP450 enzymes may be more prevalent than we have previously anticipated.

Thursday, April 2, 2009

Grapefruits and ....Pomelos


Few people in the west will know about pomelos. Apart from being a really yummy fruit, it is as potent as grapefruit in inhibiting CYP3A4, and MDR1 as well.

Here's my interpretation of the family tree of the pomelo and how it relates to the grapefruit.

Grapefruit, CYP3A4 and deep vein thrombosis

Here's an interesting story off the news:

Grapefruit diet almost cost woman her leg

PARIS, April 3, 2009 (AFP) - A woman who ate a grapefruit each day almost had to have her leg amputated because of a dangerous blood clot, according to an unusual case study reported in the Lancet.

Emergency doctors in Olympia, in the US Pacific coast state of Washington, treated the 42-year-old woman in November 2008 after she was admitted with shortness of breath, dizziness and difficulty walking. An ultrasound scan found she had a large clot blocking the veins of her left leg.

She was in imminent danger of losing the limb to gangrene, but doctors administered a clot-busting drug directly into the blockage and safely dissolved it.

The physicians found she had taken a relatively long car journey, of about an hour and a half, the day before; took a daily dose of oestrogen oral contraceptives; and had a genetic variant, called the factor V Leiden mutation, which is linked to a blood-clot disorder.

All are well-established factors for causing deep vein thrombosis (DVT), as these dangerous events are called.

But what "may well have tipped the balance" is that she had been eating a grapefruit every morning under a weight-loss diet begun three days earlier, the report said.

Grapefruit juice is known to block the action of an enzyme called CYP3A4 which breaks down the contraceptive hormone oestrogen.

This in turn boosts levels of coagulability - the tendency of blood to clot.

Grapefruit juice is broken down only very slowly, which means that it has a cumulative effect if taken daily. Thus, on the third day of her diet, the patient's oestrogen levels would have been many times above normal, helping the clot to form.

DVT has been popularly termed "economy-class syndrome," as it is associated with passengers hunched up on cramped seats in long-haul flights.

But experts say DVT can be inflicted by any kind of immobility - in cars, the office or at home - that causes the leg to be bent for long periods and prevents blood from flowing. The clotting risk is amplified by oral contraceptives and heritability.

Monday, February 23, 2009

The not so normal distribution

The normal distribution is a convenient tool when you need to describe your data. Unfortunately it introduces a blind spot when it comes to interpreting the data.

When we look at the distribution, our eye intuitively focuses on the centre of the distribution. We see the central tendency of the distribution and the variance around it. This is fine when you are describing the data. But averages don't really help you if you are the storeman who's responsible for purchasing clothes for a bunch of factory workers.

This is the odd thing about studying variability in therapeutic response to drugs. We all know variability exists. We see this in every sphere of human activity, from buying clothes and cosmetics to the ability to complete a physical fitness test. Yet inexplicably, when it comes to dosing patients, people imagine that a dosage regiment based on the mean of a relatively small unrepresentative study sample will somehow represent the dosage requirement for everyone on this planet.

Here is a series of distributions of the clearances of CYP3A5 substrates midazolam and alfentanil (Kharasch et al, Clinical Pharmacology & Therapeutics (2007) 82, 410–426). The distributions are skewed to the right and so are clearly log-normally distributed.

Here is a frequency distribution of the log-metabolic ratio for midazolam in a Chinese population (Zhu et al, Br J Clin Pharmacol. 2003 March; 55(3): 264–269).

Notice from these plots just how variable the clearances and the metabolic ratios (more about this later) are. How do we, under these conditions determine the correct doses for each patient? Clearly applying population averages will not work. Are we able to do it?

The earlier posting on wafarin show how it can be done for warfarin.More on dosage optimization issues later.